Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGA3Q9Y5H0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA3Q9Y5H0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGA3Q9Y5H0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGA3Q9Y5H0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA3Q9Y5H0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA3Q9Y5H0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 AC127496.7-201ENST00000625110 1798 ntBASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA3Q9Y5H0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGA3Q9Y5H0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGA3Q9Y5H0 ESRRAP2-201ENST00000418437 1549 ntBASIC20.64■□□□□ 0.9
PCDHGA3Q9Y5H0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 CROCCP5-201ENST00000436658 830 ntBASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 AC006970.2-201ENST00000450065 779 ntBASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 AC104771.1-201ENST00000603335 964 ntBASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 AC011767.1-201ENST00000617410 1153 ntBASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA3Q9Y5H0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 RNF165-205ENST00000588679 2904 ntBASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA3Q9Y5H0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 AC009237.3-201ENST00000393279 1427 ntBASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 C1orf229-201ENST00000623686 2258 ntBASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA3Q9Y5H0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA3Q9Y5H0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGA3Q9Y5H0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA3Q9Y5H0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA3Q9Y5H0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA3Q9Y5H0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA3Q9Y5H0 NCF1B-203ENST00000435988 1254 ntBASIC20.61■□□□□ 0.89
PCDHGA3Q9Y5H0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms