Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 AC006970.2-201ENST00000450065 779 ntBASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 TPRG1LP1-201ENST00000598702 760 ntBASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 AC092053.2-201ENST00000640557 1818 ntBASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 AL034346.1-201ENST00000568244 1277 ntBASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 BID-214ENST00000617586 542 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 ECEL1P1-201ENST00000373592 1742 ntBASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB9Q9Y5E1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 AC009237.3-201ENST00000393279 1427 ntBASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB9Q9Y5E1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDHB9Q9Y5E1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
PCDHB9Q9Y5E1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB9Q9Y5E1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB9Q9Y5E1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB9Q9Y5E1 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB9Q9Y5E1 AL355802.2-201ENST00000402069 882 ntBASIC21.64■■□□□ 1.05
PCDHB9Q9Y5E1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PCDHB9Q9Y5E1 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB9Q9Y5E1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB9Q9Y5E1 AC104771.1-201ENST00000603335 964 ntBASIC21.64■■□□□ 1.05
PCDHB9Q9Y5E1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB9Q9Y5E1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB9Q9Y5E1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB9Q9Y5E1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PCDHB9Q9Y5E1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 AC005224.4-201ENST00000583262 1652 ntBASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 ABHD17AP1-201ENST00000358206 933 ntBASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 RAP2CP1-201ENST00000605103 478 ntBASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 AL109923.1-201ENST00000618799 583 ntBASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB9Q9Y5E1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB9Q9Y5E1 TMEM191A-211ENST00000637163 1067 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms