Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 SERBP1P1-201ENST00000396021 1160 ntBASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LSM4Q9Y4Z0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM4Q9Y4Z0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LSM4Q9Y4Z0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM4Q9Y4Z0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
LSM4Q9Y4Z0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM4Q9Y4Z0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM4Q9Y4Z0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 AL138724.1-201ENST00000606771 1088 ntBASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.01■□□□□ 0.31
LSM4Q9Y4Z0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 AC009102.2-201ENST00000606772 1639 ntBASIC17■□□□□ 0.31
LSM4Q9Y4Z0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 AC099791.2-201ENST00000605725 427 ntBASIC17■□□□□ 0.31
LSM4Q9Y4Z0 AC011298.3-201ENST00000615796 283 ntBASIC17■□□□□ 0.31
LSM4Q9Y4Z0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM4Q9Y4Z0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 AC027682.1-201ENST00000562846 899 ntBASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 AF106564.1-201ENST00000607058 2553 ntBASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM4Q9Y4Z0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 AC087623.3-201ENST00000607047 1098 ntBASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 PKD1P6-201ENST00000343738 4769 ntBASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms