Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 AL162412.1-201ENST00000567129 965 ntBASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 AL034346.1-201ENST00000568244 1277 ntBASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 AL591742.1-201ENST00000604433 565 ntBASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 AC008175.2-201ENST00000612840 297 ntBASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIT1Q9Y3P8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 AC004812.2-201ENST00000611079 2094 ntBASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SIT1Q9Y3P8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SIT1Q9Y3P8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 OR7E47P-201ENST00000546390 1422 ntBASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIT1Q9Y3P8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.58■■□□□ 1.05
SIT1Q9Y3P8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SIT1Q9Y3P8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SIT1Q9Y3P8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.57■■□□□ 1.04
SIT1Q9Y3P8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIT1Q9Y3P8 MIR718-201ENST00000390190 70 ntBASIC21.57■■□□□ 1.04
SIT1Q9Y3P8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIT1Q9Y3P8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SIT1Q9Y3P8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.57■■□□□ 1.04
SIT1Q9Y3P8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.57■■□□□ 1.04
SIT1Q9Y3P8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.57■■□□□ 1.04
SIT1Q9Y3P8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
SIT1Q9Y3P8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SIT1Q9Y3P8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 LINC01124-201ENST00000409786 2117 ntBASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 LSM12P1-201ENST00000411836 588 ntBASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms