Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.39■□□□□ 0.38
RCL1Q9Y2P8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCL1Q9Y2P8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 RARRES2P2-201ENST00000394842 485 ntBASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 PVT1_1.1-201ENST00000615125 194 ntBASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 AC005703.6-201ENST00000623265 1329 ntBASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCL1Q9Y2P8 OXCT2P1-201ENST00000447263 1535 ntBASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 AC007952.6-201ENST00000573168 2673 ntBASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 AC003957.1-201ENST00000625108 2673 ntBASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 BHLHE23-202ENST00000612929 1109 ntBASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.37■□□□□ 0.37
RCL1Q9Y2P8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCL1Q9Y2P8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms