Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC087239.1-201ENST00000622671 572 ntBASIC17.24■□□□□ 0.35
FOXA2Q9Y261 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 AC027682.1-201ENST00000562846 899 ntBASIC17.23■□□□□ 0.35
FOXA2Q9Y261 AC104564.3-201ENST00000582367 638 ntBASIC17.23■□□□□ 0.35
FOXA2Q9Y261 AC233992.3-201ENST00000607491 485 ntBASIC17.23■□□□□ 0.35
FOXA2Q9Y261 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 AC005229.4-201ENST00000610085 2198 ntBASIC17.23■□□□□ 0.35
FOXA2Q9Y261 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
FOXA2Q9Y261 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXA2Q9Y261 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 MIR638-201ENST00000385237 100 ntBASIC17.21■□□□□ 0.35
FOXA2Q9Y261 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 AP001330.3-201ENST00000520123 633 ntBASIC17.21■□□□□ 0.35
FOXA2Q9Y261 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 AF213884.3-201ENST00000563833 479 ntBASIC17.21■□□□□ 0.35
FOXA2Q9Y261 AC142381.2-201ENST00000566120 298 ntBASIC17.21■□□□□ 0.35
FOXA2Q9Y261 AC010525.1-201ENST00000585559 441 ntBASIC17.21■□□□□ 0.35
FOXA2Q9Y261 AC008764.7-201ENST00000593779 1081 ntBASIC17.21■□□□□ 0.35
FOXA2Q9Y261 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
FOXA2Q9Y261 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
FOXA2Q9Y261 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.21■□□□□ 0.34
FOXA2Q9Y261 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FOXA2Q9Y261 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 AC091305.1-201ENST00000479476 895 ntBASIC17.2■□□□□ 0.34
FOXA2Q9Y261 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 AC005837.3-201ENST00000612163 286 ntBASIC17.2■□□□□ 0.34
FOXA2Q9Y261 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXA2Q9Y261 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 AC026471.6-201ENST00000622954 1905 ntBASIC17.19■□□□□ 0.34
FOXA2Q9Y261 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 AL024507.2-201ENST00000606070 2574 ntBASIC17.19■□□□□ 0.34
FOXA2Q9Y261 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 MIR939-201ENST00000401314 82 ntBASIC17.19■□□□□ 0.34
FOXA2Q9Y261 AC099791.1-201ENST00000416440 715 ntBASIC17.19■□□□□ 0.34
FOXA2Q9Y261 AC010141.3-201ENST00000456659 717 ntBASIC17.19■□□□□ 0.34
FOXA2Q9Y261 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 AC126544.1-201ENST00000580842 1059 ntBASIC17.19■□□□□ 0.34
FOXA2Q9Y261 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXA2Q9Y261 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms