Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.18■□□□□ 0.82
LHX6Q9UPM6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LHX6Q9UPM6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.18■□□□□ 0.82
LHX6Q9UPM6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.18■□□□□ 0.82
LHX6Q9UPM6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.18■□□□□ 0.82
LHX6Q9UPM6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LHX6Q9UPM6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LHX6Q9UPM6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LHX6Q9UPM6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 OR10C1-204ENST00000622521 1039 ntBASIC20.17■□□□□ 0.82
LHX6Q9UPM6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 AC013268.1-206ENST00000638368 961 ntBASIC20.17■□□□□ 0.82
LHX6Q9UPM6 AC112229.1-201ENST00000639295 961 ntBASIC20.17■□□□□ 0.82
LHX6Q9UPM6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LHX6Q9UPM6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 AC138932.3-201ENST00000567634 1902 ntBASIC20.16■□□□□ 0.82
LHX6Q9UPM6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.16■□□□□ 0.82
LHX6Q9UPM6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 AP003097.1-201ENST00000530657 1135 ntBASIC20.16■□□□□ 0.82
LHX6Q9UPM6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX6Q9UPM6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 NIFKP4-201ENST00000567275 1192 ntBASIC20.15■□□□□ 0.82
LHX6Q9UPM6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 AC008694.1-202ENST00000636953 945 ntBASIC20.15■□□□□ 0.82
LHX6Q9UPM6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LHX6Q9UPM6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
LHX6Q9UPM6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LHX6Q9UPM6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 AC093787.1-201ENST00000450396 207 ntBASIC20.14■□□□□ 0.81
LHX6Q9UPM6 BX088651.1-201ENST00000540551 451 ntBASIC20.14■□□□□ 0.81
LHX6Q9UPM6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LHX6Q9UPM6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms