Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
VTI1BQ9UEU0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 OR7E47P-201ENST00000546390 1422 ntBASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.92■□□□□ 0.94
VTI1BQ9UEU0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VTI1BQ9UEU0 AC073130.3-201ENST00000624389 2278 ntBASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 SYT6-210ENST00000641643 1587 ntBASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTI1BQ9UEU0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VTI1BQ9UEU0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VTI1BQ9UEU0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
VTI1BQ9UEU0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTI1BQ9UEU0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTI1BQ9UEU0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTI1BQ9UEU0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.89■□□□□ 0.93
VTI1BQ9UEU0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VTI1BQ9UEU0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTI1BQ9UEU0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 AC026471.6-201ENST00000622954 1905 ntBASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 AC006455.2-201ENST00000429931 906 ntBASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTI1BQ9UEU0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 LINC01521-201ENST00000504184 1943 ntBASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 UNC93B3-201ENST00000308076 687 ntBASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 AC096631.2-201ENST00000436136 790 ntBASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 AL138724.1-201ENST00000606771 1088 ntBASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VTI1BQ9UEU0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms