Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.21■■□□□ 1.31
GCNT4Q9P109 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.21■■□□□ 1.31
GCNT4Q9P109 IGHV3-19-201ENST00000521488 291 ntBASIC23.21■■□□□ 1.31
GCNT4Q9P109 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT4Q9P109 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.21■■□□□ 1.31
GCNT4Q9P109 AL034346.1-201ENST00000568244 1277 ntBASIC23.21■■□□□ 1.31
GCNT4Q9P109 AC087623.3-201ENST00000607047 1098 ntBASIC23.21■■□□□ 1.31
GCNT4Q9P109 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT4Q9P109 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT4Q9P109 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT4Q9P109 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT4Q9P109 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT4Q9P109 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.21■■□□□ 1.31
GCNT4Q9P109 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT4Q9P109 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT4Q9P109 AC026310.3-201ENST00000625186 2373 ntBASIC23.21■■□□□ 1.31
GCNT4Q9P109 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT4Q9P109 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.2■■□□□ 1.3
GCNT4Q9P109 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
GCNT4Q9P109 TSPY26P-201ENST00000476365 1326 ntBASIC23.2■■□□□ 1.3
GCNT4Q9P109 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.2■■□□□ 1.3
GCNT4Q9P109 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT4Q9P109 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.2■■□□□ 1.3
GCNT4Q9P109 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
GCNT4Q9P109 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT4Q9P109 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT4Q9P109 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT4Q9P109 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
GCNT4Q9P109 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GCNT4Q9P109 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GCNT4Q9P109 AL137060.1-201ENST00000618151 2648 ntBASIC23.19■■□□□ 1.3
GCNT4Q9P109 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
GCNT4Q9P109 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
GCNT4Q9P109 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
GCNT4Q9P109 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GCNT4Q9P109 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
GCNT4Q9P109 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.19■■□□□ 1.3
GCNT4Q9P109 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
GCNT4Q9P109 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GCNT4Q9P109 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
GCNT4Q9P109 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
GCNT4Q9P109 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
GCNT4Q9P109 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GCNT4Q9P109 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GCNT4Q9P109 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GCNT4Q9P109 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
GCNT4Q9P109 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
GCNT4Q9P109 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.17■■□□□ 1.3
GCNT4Q9P109 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT4Q9P109 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.17■■□□□ 1.3
GCNT4Q9P109 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT4Q9P109 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
GCNT4Q9P109 SMUG1P1-201ENST00000590640 811 ntBASIC23.17■■□□□ 1.3
GCNT4Q9P109 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT4Q9P109 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT4Q9P109 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.17■■□□□ 1.3
GCNT4Q9P109 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
GCNT4Q9P109 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.17■■□□□ 1.3
GCNT4Q9P109 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT4Q9P109 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
GCNT4Q9P109 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
GCNT4Q9P109 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT4Q9P109 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT4Q9P109 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.17■■□□□ 1.3
GCNT4Q9P109 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.16■■□□□ 1.3
GCNT4Q9P109 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
GCNT4Q9P109 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.16■■□□□ 1.3
GCNT4Q9P109 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.16■■□□□ 1.3
GCNT4Q9P109 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT4Q9P109 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.16■■□□□ 1.3
GCNT4Q9P109 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.16■■□□□ 1.3
GCNT4Q9P109 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
GCNT4Q9P109 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.15■■□□□ 1.3
GCNT4Q9P109 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
GCNT4Q9P109 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
GCNT4Q9P109 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GCNT4Q9P109 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.15■■□□□ 1.3
GCNT4Q9P109 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.15■■□□□ 1.3
GCNT4Q9P109 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms