Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 AC005224.4-201ENST00000583262 1652 ntBASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 AP006587.3-201ENST00000525742 1516 ntBASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CUEDC1Q9NWM3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 ID1-201ENST00000376105 1233 ntBASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 AC009237.3-201ENST00000393279 1427 ntBASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CUEDC1Q9NWM3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 YBX1P1-201ENST00000445822 960 ntBASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 IKBKGP1-201ENST00000612193 1073 ntBASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CUEDC1Q9NWM3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 LINC00565-201ENST00000562710 2331 ntBASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 AC055733.4-201ENST00000638462 1354 ntBASIC20.59■□□□□ 0.89
CUEDC1Q9NWM3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.58■□□□□ 0.89
CUEDC1Q9NWM3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.58■□□□□ 0.89
CUEDC1Q9NWM3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.58■□□□□ 0.89
CUEDC1Q9NWM3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CUEDC1Q9NWM3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CUEDC1Q9NWM3 AC010542.4-201ENST00000563151 1910 ntBASIC20.58■□□□□ 0.88
CUEDC1Q9NWM3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CUEDC1Q9NWM3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CUEDC1Q9NWM3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CUEDC1Q9NWM3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CUEDC1Q9NWM3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CUEDC1Q9NWM3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms