Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF216Q9NWF9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF216Q9NWF9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 AL024507.2-201ENST00000606070 2574 ntBASIC24.1■■□□□ 1.45
RNF216Q9NWF9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 KRT18P14-201ENST00000534205 1250 ntBASIC24.1■■□□□ 1.45
RNF216Q9NWF9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 AC068587.7-201ENST00000641602 218 ntBASIC24.1■■□□□ 1.45
RNF216Q9NWF9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF216Q9NWF9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 TERF1P2-201ENST00000583350 1212 ntBASIC24.09■■□□□ 1.45
RNF216Q9NWF9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 AC108673.2-201ENST00000608909 565 ntBASIC24.09■■□□□ 1.45
RNF216Q9NWF9 AC009118.3-201ENST00000622896 873 ntBASIC24.09■■□□□ 1.45
RNF216Q9NWF9 AC105233.4-201ENST00000642045 216 ntBASIC24.09■■□□□ 1.45
RNF216Q9NWF9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF216Q9NWF9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.08■■□□□ 1.45
RNF216Q9NWF9 PKD1P6-201ENST00000343738 4769 ntBASIC24.08■■□□□ 1.45
RNF216Q9NWF9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
RNF216Q9NWF9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.07■■□□□ 1.44
RNF216Q9NWF9 AL355994.1-201ENST00000424379 260 ntBASIC24.07■■□□□ 1.44
RNF216Q9NWF9 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 AC090192.1-201ENST00000517740 490 ntBASIC24.07■■□□□ 1.44
RNF216Q9NWF9 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 NTF6G-201ENST00000591094 616 ntBASIC24.07■■□□□ 1.44
RNF216Q9NWF9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RNF216Q9NWF9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RNF216Q9NWF9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms