Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 AC087239.1-201ENST00000622671 572 ntBASIC19.85■□□□□ 0.77
RLIMQ9NVW2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.85■□□□□ 0.77
RLIMQ9NVW2 FEM1AP4-201ENST00000443167 1987 ntBASIC19.84■□□□□ 0.77
RLIMQ9NVW2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 UNC93B3-201ENST00000308076 687 ntBASIC19.84■□□□□ 0.77
RLIMQ9NVW2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 OXCT2P1-201ENST00000447263 1535 ntBASIC19.84■□□□□ 0.77
RLIMQ9NVW2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RLIMQ9NVW2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RLIMQ9NVW2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RLIMQ9NVW2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RLIMQ9NVW2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RLIMQ9NVW2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.83■□□□□ 0.77
RLIMQ9NVW2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.83■□□□□ 0.76
RLIMQ9NVW2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RLIMQ9NVW2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RLIMQ9NVW2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.83■□□□□ 0.76
RLIMQ9NVW2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RLIMQ9NVW2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.82■□□□□ 0.76
RLIMQ9NVW2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 PKD1P6-201ENST00000343738 4769 ntBASIC19.81■□□□□ 0.76
RLIMQ9NVW2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 MIR4767-201ENST00000582827 78 ntBASIC19.81■□□□□ 0.76
RLIMQ9NVW2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RLIMQ9NVW2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 AL157384.1-201ENST00000445995 2473 ntBASIC19.8■□□□□ 0.76
RLIMQ9NVW2 AC008406.3-201ENST00000620001 1374 ntBASIC19.8■□□□□ 0.76
RLIMQ9NVW2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RLIMQ9NVW2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RLIMQ9NVW2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.79■□□□□ 0.76
RLIMQ9NVW2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RLIMQ9NVW2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RLIMQ9NVW2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RLIMQ9NVW2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.79■□□□□ 0.76
RLIMQ9NVW2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.79■□□□□ 0.76
RLIMQ9NVW2 AP005435.1-201ENST00000529293 1178 ntBASIC19.79■□□□□ 0.76
RLIMQ9NVW2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.79■□□□□ 0.76
RLIMQ9NVW2 AC024257.2-201ENST00000549699 147 ntBASIC19.79■□□□□ 0.76
RLIMQ9NVW2 AL136162.1-201ENST00000607711 1078 ntBASIC19.79■□□□□ 0.76
RLIMQ9NVW2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.79■□□□□ 0.76
RLIMQ9NVW2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RLIMQ9NVW2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms