Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 SLC7A5P2-201ENST00000553010 536 ntBASIC24.41■■□□□ 1.5
RNF146Q9NTX7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF146Q9NTX7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF146Q9NTX7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF146Q9NTX7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.39■■□□□ 1.5
RNF146Q9NTX7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RNF146Q9NTX7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.39■■□□□ 1.5
RNF146Q9NTX7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.39■■□□□ 1.5
RNF146Q9NTX7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF146Q9NTX7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RNF146Q9NTX7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF146Q9NTX7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.39■■□□□ 1.5
RNF146Q9NTX7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF146Q9NTX7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
RNF146Q9NTX7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.39■■□□□ 1.49
RNF146Q9NTX7 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.39■■□□□ 1.49
RNF146Q9NTX7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.39■■□□□ 1.49
RNF146Q9NTX7 SLC7A5P1-201ENST00000568957 537 ntBASIC24.39■■□□□ 1.49
RNF146Q9NTX7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
RNF146Q9NTX7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.38■■□□□ 1.49
RNF146Q9NTX7 GUSBP6-202ENST00000438529 1198 ntBASIC24.38■■□□□ 1.49
RNF146Q9NTX7 TSPY6P-201ENST00000448518 926 ntBASIC24.38■■□□□ 1.49
RNF146Q9NTX7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF146Q9NTX7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.38■■□□□ 1.49
RNF146Q9NTX7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF146Q9NTX7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF146Q9NTX7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF146Q9NTX7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.38■■□□□ 1.49
RNF146Q9NTX7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF146Q9NTX7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF146Q9NTX7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.37■■□□□ 1.49
RNF146Q9NTX7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF146Q9NTX7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF146Q9NTX7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.37■■□□□ 1.49
RNF146Q9NTX7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF146Q9NTX7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF146Q9NTX7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.37■■□□□ 1.49
RNF146Q9NTX7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF146Q9NTX7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 AC142086.2-201ENST00000569753 217 ntBASIC24.36■■□□□ 1.49
RNF146Q9NTX7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF146Q9NTX7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 TERF1P5-201ENST00000477545 1207 ntBASIC24.35■■□□□ 1.49
RNF146Q9NTX7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 AC013268.1-206ENST00000638368 961 ntBASIC24.35■■□□□ 1.49
RNF146Q9NTX7 AC112229.1-201ENST00000639295 961 ntBASIC24.35■■□□□ 1.49
RNF146Q9NTX7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.35■■□□□ 1.49
RNF146Q9NTX7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 329 ms