Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 KRT18P14-201ENST00000534205 1250 ntBASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 AP006587.3-201ENST00000525742 1516 ntBASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRDM9Q9NQV7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 DUX4L2-201ENST00000561772 1275 ntBASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 DUX4L6-201ENST00000626483 1275 ntBASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 DUX4L1-201ENST00000627662 1275 ntBASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 DUX4L8-201ENST00000629013 1275 ntBASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 DUX4L3-201ENST00000630187 1275 ntBASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 DUX4L7-201ENST00000630678 1275 ntBASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 DUX4L5-201ENST00000630834 1275 ntBASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM9Q9NQV7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM9Q9NQV7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM9Q9NQV7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM9Q9NQV7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.14■□□□□ 0.81
PRDM9Q9NQV7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
PRDM9Q9NQV7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM9Q9NQV7 AC104564.3-201ENST00000582367 638 ntBASIC20.14■□□□□ 0.81
PRDM9Q9NQV7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.14■□□□□ 0.81
PRDM9Q9NQV7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.14■□□□□ 0.81
PRDM9Q9NQV7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM9Q9NQV7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM9Q9NQV7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms