Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 AF131216.4-201ENST00000638924 1588 ntBASIC19.29■□□□□ 0.68
HMG20AQ9NP66 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.29■□□□□ 0.68
HMG20AQ9NP66 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20AQ9NP66 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 AC087289.5-201ENST00000586076 3175 ntBASIC19.28■□□□□ 0.68
HMG20AQ9NP66 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20AQ9NP66 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 AL353803.4-201ENST00000565882 1934 ntBASIC19.27■□□□□ 0.68
HMG20AQ9NP66 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20AQ9NP66 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
HMG20AQ9NP66 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMG20AQ9NP66 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMG20AQ9NP66 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HMG20AQ9NP66 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20AQ9NP66 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 AC103834.1-201ENST00000520383 144 ntBASIC19.25■□□□□ 0.67
HMG20AQ9NP66 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.25■□□□□ 0.67
HMG20AQ9NP66 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms