Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.95■■□□□ 1.27
RC3H2Q9HBD1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RC3H2Q9HBD1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.95■■□□□ 1.26
RC3H2Q9HBD1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
RC3H2Q9HBD1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.95■■□□□ 1.26
RC3H2Q9HBD1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.95■■□□□ 1.26
RC3H2Q9HBD1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.95■■□□□ 1.26
RC3H2Q9HBD1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.95■■□□□ 1.26
RC3H2Q9HBD1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.94■■□□□ 1.26
RC3H2Q9HBD1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 KRT18P29-201ENST00000397031 1267 ntBASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 AC069236.1-201ENST00000604339 616 ntBASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H2Q9HBD1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.92■■□□□ 1.26
RC3H2Q9HBD1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.92■■□□□ 1.26
RC3H2Q9HBD1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
RC3H2Q9HBD1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.92■■□□□ 1.26
RC3H2Q9HBD1 AC098590.1-201ENST00000468126 897 ntBASIC22.92■■□□□ 1.26
RC3H2Q9HBD1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H2Q9HBD1 RARRES2P4-201ENST00000514074 484 ntBASIC22.92■■□□□ 1.26
RC3H2Q9HBD1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.92■■□□□ 1.26
RC3H2Q9HBD1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H2Q9HBD1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.92■■□□□ 1.26
RC3H2Q9HBD1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 AC008694.1-202ENST00000636953 945 ntBASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H2Q9HBD1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 BX276092.2-201ENST00000417668 665 ntBASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 AL162412.1-201ENST00000567129 965 ntBASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H2Q9HBD1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RC3H2Q9HBD1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RC3H2Q9HBD1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.89■■□□□ 1.26
RC3H2Q9HBD1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.89■■□□□ 1.26
RC3H2Q9HBD1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.89■■□□□ 1.26
RC3H2Q9HBD1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RC3H2Q9HBD1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RC3H2Q9HBD1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RC3H2Q9HBD1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.89■■□□□ 1.26
RC3H2Q9HBD1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms