Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLK4Q9HAZ1 LINC01960-201ENST00000563759 1884 ntBASIC20.67■□□□□ 0.9
CLK4Q9HAZ1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK4Q9HAZ1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 AC019069.1-201ENST00000610008 1333 ntBASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLK4Q9HAZ1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
CLK4Q9HAZ1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CLK4Q9HAZ1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
CLK4Q9HAZ1 OXCT2P1-201ENST00000447263 1535 ntBASIC20.64■□□□□ 0.9
CLK4Q9HAZ1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLK4Q9HAZ1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK4Q9HAZ1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.64■□□□□ 0.89
CLK4Q9HAZ1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CLK4Q9HAZ1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CLK4Q9HAZ1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK4Q9HAZ1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CLK4Q9HAZ1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK4Q9HAZ1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 MIR572-201ENST00000384983 95 ntBASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLK4Q9HAZ1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 TSPY26P-201ENST00000476365 1326 ntBASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 AC105265.2-201ENST00000467189 838 ntBASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK4Q9HAZ1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 IRS3P-201ENST00000223076 1006 ntBASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK4Q9HAZ1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK4Q9HAZ1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.6■□□□□ 0.89
CLK4Q9HAZ1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CLK4Q9HAZ1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK4Q9HAZ1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLK4Q9HAZ1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK4Q9HAZ1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLK4Q9HAZ1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLK4Q9HAZ1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.6■□□□□ 0.89
CLK4Q9HAZ1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.6■□□□□ 0.89
CLK4Q9HAZ1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms