Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC25.31■■□□□ 1.64
ZNF408Q9H9D4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.31■■□□□ 1.64
ZNF408Q9H9D4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.31■■□□□ 1.64
ZNF408Q9H9D4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.31■■□□□ 1.64
ZNF408Q9H9D4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ZNF408Q9H9D4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
ZNF408Q9H9D4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZNF408Q9H9D4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ZNF408Q9H9D4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC25.31■■□□□ 1.64
ZNF408Q9H9D4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 EEF1DP3-203ENST00000566025 782 ntBASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 AC073912.3-201ENST00000624414 853 ntBASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF408Q9H9D4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 AC010331.1-201ENST00000611423 582 ntBASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 FAM197Y4-202ENST00000622692 608 ntBASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.29■■□□□ 1.64
ZNF408Q9H9D4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 MIR718-201ENST00000390190 70 ntBASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 FAM210CP-201ENST00000445714 574 ntBASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZNF408Q9H9D4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZNF408Q9H9D4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.27■■□□□ 1.64
ZNF408Q9H9D4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
ZNF408Q9H9D4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.27■■□□□ 1.64
ZNF408Q9H9D4 MIR4497-201ENST00000583208 89 ntBASIC25.27■■□□□ 1.64
ZNF408Q9H9D4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.27■■□□□ 1.64
ZNF408Q9H9D4 AC053503.5-201ENST00000601508 636 ntBASIC25.27■■□□□ 1.64
ZNF408Q9H9D4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC25.27■■□□□ 1.64
ZNF408Q9H9D4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
ZNF408Q9H9D4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZNF408Q9H9D4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 AC142381.3-201ENST00000568208 1670 ntBASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 AC079089.2-201ENST00000531211 1277 ntBASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 AC120498.10-201ENST00000621827 505 ntBASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF408Q9H9D4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 AC211429.1-201ENST00000415277 523 ntBASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF408Q9H9D4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms