Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 AC092803.2-201ENST00000564287 1899 ntBASIC20.71■□□□□ 0.91
SPTBN4Q9H254 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 KRT18P57-201ENST00000443599 1254 ntBASIC20.71■□□□□ 0.91
SPTBN4Q9H254 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPTBN4Q9H254 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SPTBN4Q9H254 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 DUSP8P5-201ENST00000422884 1815 ntBASIC20.7■□□□□ 0.9
SPTBN4Q9H254 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.7■□□□□ 0.9
SPTBN4Q9H254 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTBN4Q9H254 AC145285.6-201ENST00000604632 637 ntBASIC20.69■□□□□ 0.9
SPTBN4Q9H254 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.69■□□□□ 0.9
SPTBN4Q9H254 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTBN4Q9H254 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTBN4Q9H254 AC010141.3-201ENST00000456659 717 ntBASIC20.69■□□□□ 0.9
SPTBN4Q9H254 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPTBN4Q9H254 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.69■□□□□ 0.9
SPTBN4Q9H254 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTBN4Q9H254 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.69■□□□□ 0.9
SPTBN4Q9H254 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTBN4Q9H254 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTBN4Q9H254 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 POM121L13P-201ENST00000422362 380 ntBASIC20.67■□□□□ 0.9
SPTBN4Q9H254 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 DUSP5P1-201ENST00000441325 1139 ntBASIC20.67■□□□□ 0.9
SPTBN4Q9H254 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTBN4Q9H254 AC135731.1-201ENST00000569415 2548 ntBASIC20.66■□□□□ 0.9
SPTBN4Q9H254 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 AC113347.1-201ENST00000413321 391 ntBASIC20.66■□□□□ 0.9
SPTBN4Q9H254 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 AP003071.4-201ENST00000562276 1284 ntBASIC20.66■□□□□ 0.9
SPTBN4Q9H254 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTBN4Q9H254 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms