Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
DDX47Q9H0S4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
DDX47Q9H0S4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
DDX47Q9H0S4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DDX47Q9H0S4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
DDX47Q9H0S4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.2■■□□□ 1.14
DDX47Q9H0S4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX47Q9H0S4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DDX47Q9H0S4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
DDX47Q9H0S4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 LINC01006-201ENST00000333319 2292 ntBASIC22.19■■□□□ 1.14
DDX47Q9H0S4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX47Q9H0S4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 MIR6724-1-201ENST00000616420 92 ntBASIC22.18■■□□□ 1.14
DDX47Q9H0S4 MIR6724-2-201ENST00000616483 92 ntBASIC22.18■■□□□ 1.14
DDX47Q9H0S4 MIR6724-4-201ENST00000617390 92 ntBASIC22.18■■□□□ 1.14
DDX47Q9H0S4 MIR6724-3-201ENST00000622482 92 ntBASIC22.18■■□□□ 1.14
DDX47Q9H0S4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX47Q9H0S4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.17■■□□□ 1.14
DDX47Q9H0S4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX47Q9H0S4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX47Q9H0S4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX47Q9H0S4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX47Q9H0S4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX47Q9H0S4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.17■■□□□ 1.14
DDX47Q9H0S4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX47Q9H0S4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX47Q9H0S4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX47Q9H0S4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX47Q9H0S4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX47Q9H0S4 UNC93B8-201ENST00000511903 705 ntBASIC22.16■■□□□ 1.14
DDX47Q9H0S4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX47Q9H0S4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX47Q9H0S4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX47Q9H0S4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
DDX47Q9H0S4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX47Q9H0S4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 RARRES2P1-201ENST00000474487 481 ntBASIC22.15■■□□□ 1.14
DDX47Q9H0S4 AC009299.2-201ENST00000482477 511 ntBASIC22.15■■□□□ 1.14
DDX47Q9H0S4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
DDX47Q9H0S4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX47Q9H0S4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX47Q9H0S4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX47Q9H0S4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX47Q9H0S4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
DDX47Q9H0S4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX47Q9H0S4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.14■■□□□ 1.13
DDX47Q9H0S4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
DDX47Q9H0S4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.14■■□□□ 1.13
DDX47Q9H0S4 AC099791.2-201ENST00000605725 427 ntBASIC22.14■■□□□ 1.13
DDX47Q9H0S4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.13
DDX47Q9H0S4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX47Q9H0S4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.14■■□□□ 1.13
DDX47Q9H0S4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.14■■□□□ 1.13
DDX47Q9H0S4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.14■■□□□ 1.13
DDX47Q9H0S4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms