Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 AC083880.1-201ENST00000608266 535 ntBASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 AC069236.1-201ENST00000604339 616 ntBASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTFDC1Q9BY42 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.14■■□□□ 1.77
RTFDC1Q9BY42 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
RTFDC1Q9BY42 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
RTFDC1Q9BY42 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.13■■□□□ 1.77
RTFDC1Q9BY42 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
RTFDC1Q9BY42 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.13■■□□□ 1.77
RTFDC1Q9BY42 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RTFDC1Q9BY42 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
RTFDC1Q9BY42 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
RTFDC1Q9BY42 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
RTFDC1Q9BY42 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 AC008694.1-202ENST00000636953 945 ntBASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTFDC1Q9BY42 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 AC098590.1-201ENST00000468126 897 ntBASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.11■■□□□ 1.77
RTFDC1Q9BY42 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 BX276092.2-201ENST00000417668 665 ntBASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 RPS2P52-201ENST00000469610 820 ntBASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 RARRES2P4-201ENST00000514074 484 ntBASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTFDC1Q9BY42 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 AC093323.1-202ENST00000635031 2045 ntBASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.09■■□□□ 1.77
RTFDC1Q9BY42 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 AL162412.1-201ENST00000567129 965 ntBASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms