Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.93■■□□□ 1.58
TMEM47Q9BQJ4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.93■■□□□ 1.58
TMEM47Q9BQJ4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.93■■□□□ 1.58
TMEM47Q9BQJ4 EEF1DP3-203ENST00000566025 782 ntBASIC24.93■■□□□ 1.58
TMEM47Q9BQJ4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM47Q9BQJ4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM47Q9BQJ4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM47Q9BQJ4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
TMEM47Q9BQJ4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM47Q9BQJ4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.92■■□□□ 1.58
TMEM47Q9BQJ4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.92■■□□□ 1.58
TMEM47Q9BQJ4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.92■■□□□ 1.58
TMEM47Q9BQJ4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM47Q9BQJ4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.92■■□□□ 1.58
TMEM47Q9BQJ4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.92■■□□□ 1.58
TMEM47Q9BQJ4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.92■■□□□ 1.58
TMEM47Q9BQJ4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 AC016769.1-201ENST00000409132 1010 ntBASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TMEM47Q9BQJ4 AC003102.1-202ENST00000563394 1796 ntBASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 AP001160.3-201ENST00000601484 763 ntBASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.9■■□□□ 1.58
TMEM47Q9BQJ4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TMEM47Q9BQJ4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TMEM47Q9BQJ4 FAM99A-202ENST00000538190 1989 ntBASIC24.89■■□□□ 1.58
TMEM47Q9BQJ4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
TMEM47Q9BQJ4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TMEM47Q9BQJ4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TMEM47Q9BQJ4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.89■■□□□ 1.58
TMEM47Q9BQJ4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 AC138907.5-202ENST00000569484 235 ntBASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 AC053503.5-201ENST00000601508 636 ntBASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM47Q9BQJ4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 RARRES2P11-201ENST00000635158 484 ntBASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM47Q9BQJ4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM47Q9BQJ4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM47Q9BQJ4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM47Q9BQJ4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM47Q9BQJ4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.86■■□□□ 1.57
TMEM47Q9BQJ4 AC010141.2-201ENST00000452426 721 ntBASIC24.86■■□□□ 1.57
TMEM47Q9BQJ4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.86■■□□□ 1.57
TMEM47Q9BQJ4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM47Q9BQJ4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM47Q9BQJ4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM47Q9BQJ4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 AC012676.1-201ENST00000574705 1949 ntBASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 ECEL1P1-201ENST00000373592 1742 ntBASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TMEM47Q9BQJ4 AC010542.4-201ENST00000563151 1910 ntBASIC24.84■■□□□ 1.57
TMEM47Q9BQJ4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms