Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 TPRG1LP1-201ENST00000598702 760 ntBASIC18.79■□□□□ 0.6
FOXB1Q99853 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.79■□□□□ 0.6
FOXB1Q99853 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXB1Q99853 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FOXB1Q99853 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FOXB1Q99853 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXB1Q99853 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
FOXB1Q99853 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXB1Q99853 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXB1Q99853 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXB1Q99853 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXB1Q99853 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXB1Q99853 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
FOXB1Q99853 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXB1Q99853 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXB1Q99853 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXB1Q99853 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXB1Q99853 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FOXB1Q99853 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXB1Q99853 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.78■□□□□ 0.6
FOXB1Q99853 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXB1Q99853 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXB1Q99853 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXB1Q99853 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXB1Q99853 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXB1Q99853 AC055733.4-201ENST00000638462 1354 ntBASIC18.78■□□□□ 0.6
FOXB1Q99853 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXB1Q99853 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXB1Q99853 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.78■□□□□ 0.6
FOXB1Q99853 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXB1Q99853 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXB1Q99853 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXB1Q99853 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXB1Q99853 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXB1Q99853 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.77■□□□□ 0.6
FOXB1Q99853 FBXW4P1-201ENST00000426721 2239 ntBASIC18.77■□□□□ 0.6
FOXB1Q99853 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXB1Q99853 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXB1Q99853 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXB1Q99853 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
FOXB1Q99853 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXB1Q99853 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.77■□□□□ 0.6
FOXB1Q99853 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
FOXB1Q99853 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXB1Q99853 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXB1Q99853 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
FOXB1Q99853 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
FOXB1Q99853 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
FOXB1Q99853 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.77■□□□□ 0.59
FOXB1Q99853 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXB1Q99853 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXB1Q99853 AC010542.4-201ENST00000563151 1910 ntBASIC18.76■□□□□ 0.59
FOXB1Q99853 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXB1Q99853 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXB1Q99853 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXB1Q99853 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
FOXB1Q99853 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
FOXB1Q99853 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXB1Q99853 YBX1P1-201ENST00000445822 960 ntBASIC18.76■□□□□ 0.59
FOXB1Q99853 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXB1Q99853 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXB1Q99853 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXB1Q99853 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXB1Q99853 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXB1Q99853 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXB1Q99853 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXB1Q99853 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXB1Q99853 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
FOXB1Q99853 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXB1Q99853 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXB1Q99853 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXB1Q99853 AC123595.1-201ENST00000440769 1046 ntBASIC18.75■□□□□ 0.59
FOXB1Q99853 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXB1Q99853 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXB1Q99853 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXB1Q99853 AC104564.3-201ENST00000582367 638 ntBASIC18.75■□□□□ 0.59
FOXB1Q99853 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXB1Q99853 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXB1Q99853 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXB1Q99853 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXB1Q99853 AC003102.1-202ENST00000563394 1796 ntBASIC18.75■□□□□ 0.59
FOXB1Q99853 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXB1Q99853 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXB1Q99853 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXB1Q99853 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXB1Q99853 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
FOXB1Q99853 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXB1Q99853 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXB1Q99853 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXB1Q99853 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXB1Q99853 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXB1Q99853 LINC02228-203ENST00000641970 1355 ntBASIC18.74■□□□□ 0.59
FOXB1Q99853 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXB1Q99853 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.74■□□□□ 0.59
FOXB1Q99853 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXB1Q99853 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXB1Q99853 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXB1Q99853 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXB1Q99853 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXB1Q99853 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms