Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.74■□□□□ 0.91
VPS50Q96JG6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.74■□□□□ 0.91
VPS50Q96JG6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.74■□□□□ 0.91
VPS50Q96JG6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.74■□□□□ 0.91
VPS50Q96JG6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
VPS50Q96JG6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS50Q96JG6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS50Q96JG6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS50Q96JG6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS50Q96JG6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS50Q96JG6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS50Q96JG6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS50Q96JG6 AP005435.1-201ENST00000529293 1178 ntBASIC20.73■□□□□ 0.91
VPS50Q96JG6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.73■□□□□ 0.91
VPS50Q96JG6 AC104564.3-201ENST00000582367 638 ntBASIC20.73■□□□□ 0.91
VPS50Q96JG6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS50Q96JG6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS50Q96JG6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 AL353803.4-201ENST00000565882 1934 ntBASIC20.72■□□□□ 0.91
VPS50Q96JG6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VPS50Q96JG6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS50Q96JG6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS50Q96JG6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VPS50Q96JG6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS50Q96JG6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VPS50Q96JG6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VPS50Q96JG6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VPS50Q96JG6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS50Q96JG6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS50Q96JG6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS50Q96JG6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS50Q96JG6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS50Q96JG6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS50Q96JG6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS50Q96JG6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS50Q96JG6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS50Q96JG6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS50Q96JG6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VPS50Q96JG6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS50Q96JG6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS50Q96JG6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VPS50Q96JG6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS50Q96JG6 AC026310.3-201ENST00000625186 2373 ntBASIC20.71■□□□□ 0.91
VPS50Q96JG6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.7■□□□□ 0.91
VPS50Q96JG6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
VPS50Q96JG6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
VPS50Q96JG6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS50Q96JG6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VPS50Q96JG6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS50Q96JG6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS50Q96JG6 MIR572-201ENST00000384983 95 ntBASIC20.7■□□□□ 0.9
VPS50Q96JG6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS50Q96JG6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS50Q96JG6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS50Q96JG6 AL354811.1-201ENST00000610286 706 ntBASIC20.7■□□□□ 0.9
VPS50Q96JG6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
VPS50Q96JG6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS50Q96JG6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS50Q96JG6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS50Q96JG6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS50Q96JG6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS50Q96JG6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS50Q96JG6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS50Q96JG6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VPS50Q96JG6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VPS50Q96JG6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS50Q96JG6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.69■□□□□ 0.9
VPS50Q96JG6 AC068587.7-201ENST00000641602 218 ntBASIC20.69■□□□□ 0.9
VPS50Q96JG6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS50Q96JG6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.69■□□□□ 0.9
VPS50Q96JG6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS50Q96JG6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS50Q96JG6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VPS50Q96JG6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS50Q96JG6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS50Q96JG6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS50Q96JG6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS50Q96JG6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS50Q96JG6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS50Q96JG6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS50Q96JG6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS50Q96JG6 AC073130.3-201ENST00000624389 2278 ntBASIC20.68■□□□□ 0.9
VPS50Q96JG6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
VPS50Q96JG6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS50Q96JG6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS50Q96JG6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.68■□□□□ 0.9
VPS50Q96JG6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS50Q96JG6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms