Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
IFT43Q96FT9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
IFT43Q96FT9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
IFT43Q96FT9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
IFT43Q96FT9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
IFT43Q96FT9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
IFT43Q96FT9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
IFT43Q96FT9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.89■■□□□ 1.09
IFT43Q96FT9 AC012414.1-201ENST00000556676 535 ntBASIC21.89■■□□□ 1.09
IFT43Q96FT9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
IFT43Q96FT9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
IFT43Q96FT9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
IFT43Q96FT9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.89■■□□□ 1.09
IFT43Q96FT9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
IFT43Q96FT9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
IFT43Q96FT9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
IFT43Q96FT9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
IFT43Q96FT9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
IFT43Q96FT9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.88■■□□□ 1.09
IFT43Q96FT9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
IFT43Q96FT9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.88■■□□□ 1.09
IFT43Q96FT9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.88■■□□□ 1.09
IFT43Q96FT9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
IFT43Q96FT9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT43Q96FT9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IFT43Q96FT9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IFT43Q96FT9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
IFT43Q96FT9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IFT43Q96FT9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.87■■□□□ 1.09
IFT43Q96FT9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
IFT43Q96FT9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.87■■□□□ 1.09
IFT43Q96FT9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
IFT43Q96FT9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IFT43Q96FT9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IFT43Q96FT9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
IFT43Q96FT9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.87■■□□□ 1.09
IFT43Q96FT9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.87■■□□□ 1.09
IFT43Q96FT9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.86■■□□□ 1.09
IFT43Q96FT9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IFT43Q96FT9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
IFT43Q96FT9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
IFT43Q96FT9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.86■■□□□ 1.09
IFT43Q96FT9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IFT43Q96FT9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.86■■□□□ 1.09
IFT43Q96FT9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.86■■□□□ 1.09
IFT43Q96FT9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IFT43Q96FT9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IFT43Q96FT9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IFT43Q96FT9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.86■■□□□ 1.09
IFT43Q96FT9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IFT43Q96FT9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.85■■□□□ 1.09
IFT43Q96FT9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
IFT43Q96FT9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
IFT43Q96FT9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
IFT43Q96FT9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
IFT43Q96FT9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IFT43Q96FT9 AL137060.1-201ENST00000618151 2648 ntBASIC21.85■■□□□ 1.09
IFT43Q96FT9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IFT43Q96FT9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
IFT43Q96FT9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IFT43Q96FT9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IFT43Q96FT9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.85■■□□□ 1.09
IFT43Q96FT9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.85■■□□□ 1.09
IFT43Q96FT9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.85■■□□□ 1.09
IFT43Q96FT9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
IFT43Q96FT9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.85■■□□□ 1.09
IFT43Q96FT9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IFT43Q96FT9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.85■■□□□ 1.09
IFT43Q96FT9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
IFT43Q96FT9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.85■■□□□ 1.09
IFT43Q96FT9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IFT43Q96FT9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IFT43Q96FT9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IFT43Q96FT9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IFT43Q96FT9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IFT43Q96FT9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
IFT43Q96FT9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms