Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AL121603.2-201ENST00000557373 2117 ntBASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 OXCT2P1-201ENST00000447263 1535 ntBASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 AC133637.1-201ENST00000624115 1537 ntBASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXRED1Q96CU9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXRED1Q96CU9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 AC087239.1-201ENST00000622671 572 ntBASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXRED1Q96CU9 AC073130.3-201ENST00000624389 2278 ntBASIC18.46■□□□□ 0.54
FOXRED1Q96CU9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXRED1Q96CU9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
FOXRED1Q96CU9 AF106564.1-201ENST00000607058 2553 ntBASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms