Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDF1Q96CC6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.81■□□□□ 0.92
RHBDF1Q96CC6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RHBDF1Q96CC6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RHBDF1Q96CC6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDF1Q96CC6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDF1Q96CC6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDF1Q96CC6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.81■□□□□ 0.92
RHBDF1Q96CC6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 SUDS3P1-201ENST00000505831 966 ntBASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 AC003102.1-202ENST00000563394 1796 ntBASIC20.8■□□□□ 0.92
RHBDF1Q96CC6 AP006587.3-201ENST00000525742 1516 ntBASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 Z98882.1-201ENST00000622160 2253 ntBASIC20.79■□□□□ 0.92
RHBDF1Q96CC6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 AL024507.2-201ENST00000606070 2574 ntBASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDF1Q96CC6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 AC105233.4-201ENST00000642045 216 ntBASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.77■□□□□ 0.92
RHBDF1Q96CC6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 MIR572-201ENST00000384983 95 ntBASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RHBDF1Q96CC6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.75■□□□□ 0.91
RHBDF1Q96CC6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHBDF1Q96CC6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.74■□□□□ 0.91
RHBDF1Q96CC6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHBDF1Q96CC6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHBDF1Q96CC6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHBDF1Q96CC6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RHBDF1Q96CC6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RHBDF1Q96CC6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms