Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF25Q93038 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF25Q93038 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF25Q93038 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF25Q93038 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF25Q93038 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TNFRSF25Q93038 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.39■■□□□ 1.49
TNFRSF25Q93038 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.39■■□□□ 1.49
TNFRSF25Q93038 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.39■■□□□ 1.49
TNFRSF25Q93038 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TNFRSF25Q93038 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
TNFRSF25Q93038 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF25Q93038 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.37■■□□□ 1.49
TNFRSF25Q93038 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TNFRSF25Q93038 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF25Q93038 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.36■■□□□ 1.49
TNFRSF25Q93038 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.36■■□□□ 1.49
TNFRSF25Q93038 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.36■■□□□ 1.49
TNFRSF25Q93038 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.36■■□□□ 1.49
TNFRSF25Q93038 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF25Q93038 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF25Q93038 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.34■■□□□ 1.49
TNFRSF25Q93038 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF25Q93038 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.34■■□□□ 1.49
TNFRSF25Q93038 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.34■■□□□ 1.49
TNFRSF25Q93038 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.34■■□□□ 1.49
TNFRSF25Q93038 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF25Q93038 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF25Q93038 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF25Q93038 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.34■■□□□ 1.49
TNFRSF25Q93038 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF25Q93038 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TNFRSF25Q93038 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TNFRSF25Q93038 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.33■■□□□ 1.49
TNFRSF25Q93038 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.33■■□□□ 1.49
TNFRSF25Q93038 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.33■■□□□ 1.49
TNFRSF25Q93038 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TNFRSF25Q93038 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF25Q93038 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
TNFRSF25Q93038 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
TNFRSF25Q93038 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF25Q93038 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.32■■□□□ 1.48
TNFRSF25Q93038 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNFRSF25Q93038 AC007375.3-201ENST00000600936 2314 ntBASIC24.32■■□□□ 1.48
TNFRSF25Q93038 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 AC123595.1-201ENST00000440769 1046 ntBASIC24.31■■□□□ 1.48
TNFRSF25Q93038 YBX1P1-201ENST00000445822 960 ntBASIC24.31■■□□□ 1.48
TNFRSF25Q93038 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 AC104564.3-201ENST00000582367 638 ntBASIC24.31■■□□□ 1.48
TNFRSF25Q93038 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 CLDN5-201ENST00000403084 2357 ntBASIC24.31■■□□□ 1.48
TNFRSF25Q93038 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFRSF25Q93038 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms