Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 AC005837.3-201ENST00000612163 286 ntBASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40AQ8WXH6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 C17orf82-201ENST00000623772 1530 ntBASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40AQ8WXH6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 SYT6-210ENST00000641643 1587 ntBASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 AC099791.2-201ENST00000605725 427 ntBASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 AC241377.3-202ENST00000626088 1088 ntBASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 AC241585.3-202ENST00000628937 1088 ntBASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 AC245100.8-202ENST00000629247 1058 ntBASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 AC135279.3-201ENST00000610945 1311 ntBASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40AQ8WXH6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB40AQ8WXH6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.64■□□□□ 0.58
RAB40AQ8WXH6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 DUX4L4-201ENST00000566884 1269 ntBASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40AQ8WXH6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 AC092667.1-201ENST00000434301 2586 ntBASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 AC024257.2-201ENST00000549699 147 ntBASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB40AQ8WXH6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms