Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.74■■□□□ 1.07
SCG3Q8WXD2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.74■■□□□ 1.07
SCG3Q8WXD2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.74■■□□□ 1.07
SCG3Q8WXD2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.74■■□□□ 1.07
SCG3Q8WXD2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCG3Q8WXD2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCG3Q8WXD2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCG3Q8WXD2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCG3Q8WXD2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCG3Q8WXD2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCG3Q8WXD2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 MIR572-201ENST00000384983 95 ntBASIC21.73■■□□□ 1.07
SCG3Q8WXD2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SCG3Q8WXD2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 AC034268.1-201ENST00000441047 882 ntBASIC21.72■■□□□ 1.07
SCG3Q8WXD2 YBX1P1-201ENST00000445822 960 ntBASIC21.72■■□□□ 1.07
SCG3Q8WXD2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCG3Q8WXD2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 AL354811.1-201ENST00000610286 706 ntBASIC21.71■■□□□ 1.07
SCG3Q8WXD2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCG3Q8WXD2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.7■■□□□ 1.06
SCG3Q8WXD2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCG3Q8WXD2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.7■■□□□ 1.06
SCG3Q8WXD2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCG3Q8WXD2 AP005435.1-201ENST00000529293 1178 ntBASIC21.7■■□□□ 1.06
SCG3Q8WXD2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCG3Q8WXD2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.7■■□□□ 1.06
SCG3Q8WXD2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCG3Q8WXD2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
SCG3Q8WXD2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCG3Q8WXD2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCG3Q8WXD2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 AC010525.1-201ENST00000585559 441 ntBASIC21.68■■□□□ 1.06
SCG3Q8WXD2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG3Q8WXD2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCG3Q8WXD2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCG3Q8WXD2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms