Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNED1Q8TER0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNED1Q8TER0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNED1Q8TER0 BX276092.2-201ENST00000417668 665 ntBASIC26.22■■□□□ 1.79
SNED1Q8TER0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.22■■□□□ 1.79
SNED1Q8TER0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
SNED1Q8TER0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNED1Q8TER0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SNED1Q8TER0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.22■■□□□ 1.79
SNED1Q8TER0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.22■■□□□ 1.79
SNED1Q8TER0 AC091874.3-201ENST00000512672 1195 ntBASIC26.22■■□□□ 1.79
SNED1Q8TER0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.22■■□□□ 1.79
SNED1Q8TER0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.22■■□□□ 1.79
SNED1Q8TER0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNED1Q8TER0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNED1Q8TER0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNED1Q8TER0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.21■■□□□ 1.79
SNED1Q8TER0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.21■■□□□ 1.79
SNED1Q8TER0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.21■■□□□ 1.79
SNED1Q8TER0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SNED1Q8TER0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.21■■□□□ 1.79
SNED1Q8TER0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
SNED1Q8TER0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.21■■□□□ 1.79
SNED1Q8TER0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNED1Q8TER0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SNED1Q8TER0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNED1Q8TER0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC26.2■■□□□ 1.78
SNED1Q8TER0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.2■■□□□ 1.78
SNED1Q8TER0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNED1Q8TER0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
SNED1Q8TER0 ESRRAP1-201ENST00000400596 1257 ntBASIC26.2■■□□□ 1.78
SNED1Q8TER0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.2■■□□□ 1.78
SNED1Q8TER0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SNED1Q8TER0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.2■■□□□ 1.78
SNED1Q8TER0 AC069236.1-201ENST00000604339 616 ntBASIC26.2■■□□□ 1.78
SNED1Q8TER0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.2■■□□□ 1.78
SNED1Q8TER0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNED1Q8TER0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNED1Q8TER0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNED1Q8TER0 ANOS2P-203ENST00000472227 1816 ntBASIC26.19■■□□□ 1.78
SNED1Q8TER0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SNED1Q8TER0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNED1Q8TER0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
SNED1Q8TER0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.19■■□□□ 1.78
SNED1Q8TER0 AL034346.1-201ENST00000568244 1277 ntBASIC26.19■■□□□ 1.78
SNED1Q8TER0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.19■■□□□ 1.78
SNED1Q8TER0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNED1Q8TER0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SNED1Q8TER0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNED1Q8TER0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.18■■□□□ 1.78
SNED1Q8TER0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNED1Q8TER0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SNED1Q8TER0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.18■■□□□ 1.78
SNED1Q8TER0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNED1Q8TER0 AL596275.1-201ENST00000423464 877 ntBASIC26.18■■□□□ 1.78
SNED1Q8TER0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SNED1Q8TER0 AL162412.1-201ENST00000567129 965 ntBASIC26.18■■□□□ 1.78
SNED1Q8TER0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.18■■□□□ 1.78
SNED1Q8TER0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNED1Q8TER0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.18■■□□□ 1.78
SNED1Q8TER0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SNED1Q8TER0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SNED1Q8TER0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
SNED1Q8TER0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNED1Q8TER0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.17■■□□□ 1.78
SNED1Q8TER0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNED1Q8TER0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SNED1Q8TER0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.17■■□□□ 1.78
SNED1Q8TER0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SNED1Q8TER0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.17■■□□□ 1.78
SNED1Q8TER0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNED1Q8TER0 AC093323.1-202ENST00000635031 2045 ntBASIC26.17■■□□□ 1.78
SNED1Q8TER0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.17■■□□□ 1.78
SNED1Q8TER0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNED1Q8TER0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNED1Q8TER0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNED1Q8TER0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.16■■□□□ 1.78
SNED1Q8TER0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.16■■□□□ 1.78
SNED1Q8TER0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.16■■□□□ 1.78
SNED1Q8TER0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNED1Q8TER0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
SNED1Q8TER0 AC010980.2-201ENST00000587099 1412 ntBASIC26.15■■□□□ 1.78
SNED1Q8TER0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNED1Q8TER0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNED1Q8TER0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNED1Q8TER0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
SNED1Q8TER0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.15■■□□□ 1.78
SNED1Q8TER0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.15■■□□□ 1.78
SNED1Q8TER0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.15■■□□□ 1.78
SNED1Q8TER0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.15■■□□□ 1.78
SNED1Q8TER0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
SNED1Q8TER0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNED1Q8TER0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNED1Q8TER0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNED1Q8TER0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.15■■□□□ 1.78
SNED1Q8TER0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.15■■□□□ 1.78
SNED1Q8TER0 OR7E47P-201ENST00000546390 1422 ntBASIC26.15■■□□□ 1.78
SNED1Q8TER0 RBM17P2-201ENST00000616397 1405 ntBASIC26.15■■□□□ 1.78
SNED1Q8TER0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNED1Q8TER0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms