Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SMIM11BQ8TCY0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 LONRF2P2-201ENST00000439212 571 ntBASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 AC009086.3-201ENST00000623486 1008 ntBASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.84□□□□□ -0.19
SMIM11BQ8TCY0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.83□□□□□ -0.19
SMIM11BQ8TCY0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
SMIM11BQ8TCY0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 AC104564.3-201ENST00000582367 638 ntBASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 GABARAPL3-202ENST00000624044 1851 ntBASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 AFG3L1P-217ENST00000557444 2447 ntBASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 PCDHAC2-203ENST00000615316 3011 ntBASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.82□□□□□ -0.2
SMIM11BQ8TCY0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms