Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF1Q8NEP3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF1Q8NEP3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
DNAAF1Q8NEP3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
DNAAF1Q8NEP3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 AL356740.2-201ENST00000601559 647 ntBASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 AC092667.1-201ENST00000434301 2586 ntBASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF1Q8NEP3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
DNAAF1Q8NEP3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 GUSBP5-201ENST00000418136 578 ntBASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF1Q8NEP3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 MIR3621-201ENST00000580529 85 ntBASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAAF1Q8NEP3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.66■□□□□ 0.58
DNAAF1Q8NEP3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 AC133637.1-201ENST00000624115 1537 ntBASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms