Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 FBXW4P1-201ENST00000426721 2239 ntBASIC17.64■□□□□ 0.41
ZNF439Q8NDP4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ZNF439Q8NDP4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF439Q8NDP4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ZNF439Q8NDP4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 AC133561.4-201ENST00000566112 224 ntBASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF439Q8NDP4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF439Q8NDP4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 AC106739.1-201ENST00000617035 715 ntBASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 AC110285.6-201ENST00000617652 491 ntBASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 AL024507.2-201ENST00000606070 2574 ntBASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF439Q8NDP4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 PBX2P1-201ENST00000493219 1291 ntBASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF439Q8NDP4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms