Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 AC087239.1-201ENST00000622671 572 ntBASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM116Q8NCL8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM116Q8NCL8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 AC131281.2-201ENST00000520478 145 ntBASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 MIR4466-201ENST00000606121 54 ntBASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM116Q8NCL8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 Z98882.1-201ENST00000622160 2253 ntBASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 AC138932.1-201ENST00000534164 6830 ntBASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM116Q8NCL8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 DUX4L19-201ENST00000557448 1267 ntBASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM116Q8NCL8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 AL136116.3-201ENST00000402907 1138 ntBASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 AC010141.3-201ENST00000456659 717 ntBASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 AC104564.3-201ENST00000582367 638 ntBASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM116Q8NCL8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TMEM116Q8NCL8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TMEM116Q8NCL8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEM116Q8NCL8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM116Q8NCL8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM116Q8NCL8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms