Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 FAM99A-202ENST00000538190 1989 ntBASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIML2Q8N7C3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 AL356740.2-201ENST00000601559 647 ntBASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIML2Q8N7C3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 AC133637.1-201ENST00000624115 1537 ntBASIC20.48■□□□□ 0.87
TRIML2Q8N7C3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIML2Q8N7C3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIML2Q8N7C3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIML2Q8N7C3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIML2Q8N7C3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIML2Q8N7C3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIML2Q8N7C3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIML2Q8N7C3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIML2Q8N7C3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.47■□□□□ 0.87
TRIML2Q8N7C3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 AL035685.1-201ENST00000636663 812 ntBASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIML2Q8N7C3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.87
TRIML2Q8N7C3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 pRNA.6-201ENST00000610482 90 ntBASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 pRNA.5-201ENST00000612139 90 ntBASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 pRNA.11-201ENST00000618423 90 ntBASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 pRNA.13-201ENST00000619112 90 ntBASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
TRIML2Q8N7C3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIML2Q8N7C3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIML2Q8N7C3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms