Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 EEF1DP3-203ENST00000566025 782 ntBASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 AL117328.2-201ENST00000624617 1940 ntBASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF39Q8N4T4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 AC092666.2-201ENST00000613287 246 ntBASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.21■□□□□ 0.83
ARHGEF39Q8N4T4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 AC104187.1-201ENST00000607510 612 ntBASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 IKBKGP1-201ENST00000612193 1073 ntBASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.2■□□□□ 0.82
ARHGEF39Q8N4T4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 AC053503.5-201ENST00000601508 636 ntBASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ARHGEF39Q8N4T4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 KRT19P1-201ENST00000405746 1186 ntBASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 AC006015.1-201ENST00000429970 570 ntBASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF39Q8N4T4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 AC138907.5-202ENST00000569484 235 ntBASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 AC010542.4-201ENST00000563151 1910 ntBASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF39Q8N4T4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms