Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
ARHGEF28Q8N1W1 AC069152.1-201ENST00000438030 544 ntBASIC29.88■■■□□ 2.37
ARHGEF28Q8N1W1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC29.88■■■□□ 2.37
ARHGEF28Q8N1W1 MIR4651-201ENST00000582622 73 ntBASIC29.88■■■□□ 2.37
ARHGEF28Q8N1W1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
ARHGEF28Q8N1W1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
ARHGEF28Q8N1W1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ARHGEF28Q8N1W1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ARHGEF28Q8N1W1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC29.87■■■□□ 2.37
ARHGEF28Q8N1W1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC29.87■■■□□ 2.37
ARHGEF28Q8N1W1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC29.87■■■□□ 2.37
ARHGEF28Q8N1W1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC29.87■■■□□ 2.37
ARHGEF28Q8N1W1 SLC7A5P1-201ENST00000568957 537 ntBASIC29.87■■■□□ 2.37
ARHGEF28Q8N1W1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC29.87■■■□□ 2.37
ARHGEF28Q8N1W1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC29.87■■■□□ 2.37
ARHGEF28Q8N1W1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
ARHGEF28Q8N1W1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 AC083906.2-201ENST00000511578 360 ntBASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 KRT18P6-201ENST00000555540 1265 ntBASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ARHGEF28Q8N1W1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC29.85■■■□□ 2.37
ARHGEF28Q8N1W1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC29.85■■■□□ 2.37
ARHGEF28Q8N1W1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
ARHGEF28Q8N1W1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ARHGEF28Q8N1W1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC29.85■■■□□ 2.37
ARHGEF28Q8N1W1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC29.85■■■□□ 2.37
ARHGEF28Q8N1W1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ARHGEF28Q8N1W1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ARHGEF28Q8N1W1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ARHGEF28Q8N1W1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ARHGEF28Q8N1W1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC29.83■■■□□ 2.37
ARHGEF28Q8N1W1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC29.83■■■□□ 2.37
ARHGEF28Q8N1W1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ARHGEF28Q8N1W1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
ARHGEF28Q8N1W1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
ARHGEF28Q8N1W1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC29.82■■■□□ 2.36
ARHGEF28Q8N1W1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
ARHGEF28Q8N1W1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
ARHGEF28Q8N1W1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
ARHGEF28Q8N1W1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
ARHGEF28Q8N1W1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC29.82■■■□□ 2.36
ARHGEF28Q8N1W1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC29.82■■■□□ 2.36
ARHGEF28Q8N1W1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
ARHGEF28Q8N1W1 AC127496.7-201ENST00000625110 1798 ntBASIC29.81■■■□□ 2.36
ARHGEF28Q8N1W1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC29.81■■■□□ 2.36
ARHGEF28Q8N1W1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
ARHGEF28Q8N1W1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC29.81■■■□□ 2.36
ARHGEF28Q8N1W1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
ARHGEF28Q8N1W1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC29.81■■■□□ 2.36
ARHGEF28Q8N1W1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC29.81■■■□□ 2.36
ARHGEF28Q8N1W1 KRT16P2-201ENST00000414673 1423 ntBASIC29.81■■■□□ 2.36
ARHGEF28Q8N1W1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ARHGEF28Q8N1W1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC29.8■■■□□ 2.36
ARHGEF28Q8N1W1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC29.8■■■□□ 2.36
ARHGEF28Q8N1W1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC29.8■■■□□ 2.36
ARHGEF28Q8N1W1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC29.8■■■□□ 2.36
ARHGEF28Q8N1W1 AC016405.3-201ENST00000607710 860 ntBASIC29.8■■■□□ 2.36
ARHGEF28Q8N1W1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC29.8■■■□□ 2.36
ARHGEF28Q8N1W1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ARHGEF28Q8N1W1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
ARHGEF28Q8N1W1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC29.79■■■□□ 2.36
ARHGEF28Q8N1W1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
ARHGEF28Q8N1W1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ARHGEF28Q8N1W1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms