Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
ABCA6Q8N139 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
ABCA6Q8N139 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC32.09■■■□□ 2.73
ABCA6Q8N139 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
ABCA6Q8N139 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC32.08■■■□□ 2.73
ABCA6Q8N139 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
ABCA6Q8N139 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
ABCA6Q8N139 AC073648.6-201ENST00000641589 218 ntBASIC32.08■■■□□ 2.73
ABCA6Q8N139 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC32.08■■■□□ 2.73
ABCA6Q8N139 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC32.08■■■□□ 2.73
ABCA6Q8N139 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
ABCA6Q8N139 BAALC-201ENST00000297574 801 ntTSL 3 BASIC32.08■■■□□ 2.73
ABCA6Q8N139 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
ABCA6Q8N139 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC32.08■■■□□ 2.73
ABCA6Q8N139 AC008694.1-202ENST00000636953 945 ntBASIC32.08■■■□□ 2.73
ABCA6Q8N139 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
ABCA6Q8N139 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
ABCA6Q8N139 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ABCA6Q8N139 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ABCA6Q8N139 ABCB10P4-201ENST00000566803 2184 ntBASIC32.07■■■□□ 2.72
ABCA6Q8N139 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ABCA6Q8N139 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ABCA6Q8N139 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
ABCA6Q8N139 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC32.07■■■□□ 2.72
ABCA6Q8N139 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC32.07■■■□□ 2.72
ABCA6Q8N139 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC32.07■■■□□ 2.72
ABCA6Q8N139 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ABCA6Q8N139 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
ABCA6Q8N139 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC32.06■■■□□ 2.72
ABCA6Q8N139 LINC01124-201ENST00000409786 2117 ntBASIC32.06■■■□□ 2.72
ABCA6Q8N139 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
ABCA6Q8N139 AL162412.1-201ENST00000567129 965 ntBASIC32.06■■■□□ 2.72
ABCA6Q8N139 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ABCA6Q8N139 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
ABCA6Q8N139 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
ABCA6Q8N139 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ABCA6Q8N139 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC32.06■■■□□ 2.72
ABCA6Q8N139 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ABCA6Q8N139 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC32.05■■■□□ 2.72
ABCA6Q8N139 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC32.05■■■□□ 2.72
ABCA6Q8N139 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC32.05■■■□□ 2.72
ABCA6Q8N139 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC32.05■■■□□ 2.72
ABCA6Q8N139 RBM17P2-201ENST00000616397 1405 ntBASIC32.05■■■□□ 2.72
ABCA6Q8N139 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
ABCA6Q8N139 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC32.05■■■□□ 2.72
ABCA6Q8N139 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ABCA6Q8N139 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ABCA6Q8N139 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC32.04■■■□□ 2.72
ABCA6Q8N139 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ABCA6Q8N139 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
ABCA6Q8N139 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC32.04■■■□□ 2.72
ABCA6Q8N139 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
ABCA6Q8N139 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ABCA6Q8N139 AC008550.1-201ENST00000511500 884 ntBASIC32.04■■■□□ 2.72
ABCA6Q8N139 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC32.04■■■□□ 2.72
ABCA6Q8N139 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ABCA6Q8N139 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ABCA6Q8N139 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
ABCA6Q8N139 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ABCA6Q8N139 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC32.03■■■□□ 2.72
ABCA6Q8N139 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC32.03■■■□□ 2.72
ABCA6Q8N139 AC008403.3-201ENST00000598924 454 ntBASIC32.03■■■□□ 2.72
ABCA6Q8N139 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
ABCA6Q8N139 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ABCA6Q8N139 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC32.03■■■□□ 2.72
ABCA6Q8N139 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
ABCA6Q8N139 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ABCA6Q8N139 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ABCA6Q8N139 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
ABCA6Q8N139 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ABCA6Q8N139 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ABCA6Q8N139 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ABCA6Q8N139 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
ABCA6Q8N139 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
ABCA6Q8N139 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC32.01■■■□□ 2.72
ABCA6Q8N139 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC32.01■■■□□ 2.72
ABCA6Q8N139 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.72
ABCA6Q8N139 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.72
ABCA6Q8N139 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
ABCA6Q8N139 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
ABCA6Q8N139 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
ABCA6Q8N139 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ABCA6Q8N139 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
ABCA6Q8N139 AL359736.2-201ENST00000621992 437 ntBASIC32■■■□□ 2.71
ABCA6Q8N139 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC32■■■□□ 2.71
ABCA6Q8N139 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ABCA6Q8N139 LINC00526-201ENST00000581067 1875 ntBASIC32■■■□□ 2.71
ABCA6Q8N139 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
ABCA6Q8N139 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
ABCA6Q8N139 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.99■■■□□ 2.71
ABCA6Q8N139 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
ABCA6Q8N139 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms