Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 AC016405.3-201ENST00000607710 860 ntBASIC18.22■□□□□ 0.51
CSMD2Q7Z408 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.22■□□□□ 0.51
CSMD2Q7Z408 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 AC097493.4-201ENST00000641197 219 ntBASIC18.21■□□□□ 0.51
CSMD2Q7Z408 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 REXO1L12P-201ENST00000622156 912 ntBASIC18.21■□□□□ 0.51
CSMD2Q7Z408 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.21■□□□□ 0.51
CSMD2Q7Z408 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CSMD2Q7Z408 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD2Q7Z408 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD2Q7Z408 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD2Q7Z408 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.2■□□□□ 0.5
CSMD2Q7Z408 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD2Q7Z408 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.2■□□□□ 0.5
CSMD2Q7Z408 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.2■□□□□ 0.5
CSMD2Q7Z408 AC145676.1-201ENST00000514988 2004 ntBASIC18.2■□□□□ 0.5
CSMD2Q7Z408 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CSMD2Q7Z408 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD2Q7Z408 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 C1QBPP2-201ENST00000528754 825 ntBASIC18.19■□□□□ 0.5
CSMD2Q7Z408 KRT18P20-201ENST00000548986 1279 ntBASIC18.19■□□□□ 0.5
CSMD2Q7Z408 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 AC010141.2-201ENST00000452426 721 ntBASIC18.19■□□□□ 0.5
CSMD2Q7Z408 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD2Q7Z408 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 AC068587.7-201ENST00000641602 218 ntBASIC18.18■□□□□ 0.5
CSMD2Q7Z408 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 C2orf69P4-201ENST00000565394 541 ntBASIC18.18■□□□□ 0.5
CSMD2Q7Z408 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 AC138907.5-202ENST00000569484 235 ntBASIC18.18■□□□□ 0.5
CSMD2Q7Z408 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CSMD2Q7Z408 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 AC010980.2-201ENST00000587099 1412 ntBASIC18.17■□□□□ 0.5
CSMD2Q7Z408 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms