Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 AC073912.3-201ENST00000624414 853 ntBASIC15.01□□□□□ -0.01
CSMD3Q7Z407 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD3Q7Z407 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15□□□□□ -0.01
CSMD3Q7Z407 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CSMD3Q7Z407 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD3Q7Z407 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD3Q7Z407 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD3Q7Z407 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15□□□□□ -0.01
CSMD3Q7Z407 LINC01023-201ENST00000606054 436 ntBASIC15□□□□□ -0.01
CSMD3Q7Z407 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD3Q7Z407 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD3Q7Z407 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC15□□□□□ -0.01
CSMD3Q7Z407 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD3Q7Z407 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD3Q7Z407 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15□□□□□ -0.01
CSMD3Q7Z407 AC008403.3-201ENST00000598924 454 ntBASIC15□□□□□ -0.01
CSMD3Q7Z407 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 AC010331.1-201ENST00000611423 582 ntBASIC14.99□□□□□ -0.01
CSMD3Q7Z407 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.99□□□□□ -0.01
CSMD3Q7Z407 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 MIR1224-201ENST00000408193 85 ntBASIC14.98□□□□□ -0.01
CSMD3Q7Z407 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 LINC01960-201ENST00000563759 1884 ntBASIC14.98□□□□□ -0.01
CSMD3Q7Z407 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 EED-207ENST00000528180 1745 ntTSL 5 BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 LINC01124-201ENST00000409786 2117 ntBASIC14.98□□□□□ -0.01
CSMD3Q7Z407 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD3Q7Z407 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 AP006587.3-201ENST00000525742 1516 ntBASIC14.97□□□□□ -0.01
CSMD3Q7Z407 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD3Q7Z407 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 RCN1P1-201ENST00000400413 996 ntBASIC14.96□□□□□ -0.01
CSMD3Q7Z407 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD3Q7Z407 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.96□□□□□ -0.02
CSMD3Q7Z407 AL139125.2-201ENST00000623134 1869 ntBASIC14.96□□□□□ -0.02
CSMD3Q7Z407 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms