Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.45■■□□□ 1.03
LYSMD3Q7Z3D4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 AP006587.3-201ENST00000525742 1516 ntBASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD3Q7Z3D4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 AC123595.1-201ENST00000440769 1046 ntBASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 LINC02228-203ENST00000641970 1355 ntBASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD3Q7Z3D4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LYSMD3Q7Z3D4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.43■■□□□ 1.02
LYSMD3Q7Z3D4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LYSMD3Q7Z3D4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.43■■□□□ 1.02
LYSMD3Q7Z3D4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
LYSMD3Q7Z3D4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.43■■□□□ 1.02
LYSMD3Q7Z3D4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.43■■□□□ 1.02
LYSMD3Q7Z3D4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.43■■□□□ 1.02
LYSMD3Q7Z3D4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
LYSMD3Q7Z3D4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LYSMD3Q7Z3D4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 AC087623.3-201ENST00000607047 1098 ntBASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 AC055733.4-201ENST00000638462 1354 ntBASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.42■■□□□ 1.02
LYSMD3Q7Z3D4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 CCDC92B-201ENST00000575506 885 ntBASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LYSMD3Q7Z3D4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD3Q7Z3D4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
LYSMD3Q7Z3D4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
LYSMD3Q7Z3D4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LYSMD3Q7Z3D4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
LYSMD3Q7Z3D4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LYSMD3Q7Z3D4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 227.6 ms