Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP54Q7Z3B4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 TERF1P2-201ENST00000583350 1212 ntBASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP54Q7Z3B4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 CCDC92B-201ENST00000575506 885 ntBASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 AC087623.3-201ENST00000607047 1098 ntBASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.7■□□□□ 0.74
NUP54Q7Z3B4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 LINC00565-201ENST00000562710 2331 ntBASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 AC034268.1-201ENST00000441047 882 ntBASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 MIR5787-201ENST00000611784 55 ntBASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.69■□□□□ 0.74
NUP54Q7Z3B4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 KRT18P14-201ENST00000534205 1250 ntBASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms