Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP1BQ7LBR1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP1BQ7LBR1 YBX1P1-201ENST00000445822 960 ntBASIC19.56■□□□□ 0.72
CHMP1BQ7LBR1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMP1BQ7LBR1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 LINC01960-201ENST00000563759 1884 ntBASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 OXCT2P1-201ENST00000447263 1535 ntBASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP1BQ7LBR1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 AC027612.3-201ENST00000413684 1047 ntBASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP1BQ7LBR1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP1BQ7LBR1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 AC123595.1-201ENST00000440769 1046 ntBASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 AC087623.3-201ENST00000607047 1098 ntBASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CHMP1BQ7LBR1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CHMP1BQ7LBR1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CHMP1BQ7LBR1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP1BQ7LBR1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP1BQ7LBR1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 AC034268.1-201ENST00000441047 882 ntBASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP1BQ7LBR1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 LINC02228-203ENST00000641970 1355 ntBASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 AC007375.3-201ENST00000600936 2314 ntBASIC19.5■□□□□ 0.71
CHMP1BQ7LBR1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms