Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.94■□□□□ 0.78
RTL4Q6ZR62 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.94■□□□□ 0.78
RTL4Q6ZR62 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.94■□□□□ 0.78
RTL4Q6ZR62 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL4Q6ZR62 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL4Q6ZR62 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL4Q6ZR62 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 AL162430.1-201ENST00000480705 870 ntBASIC19.93■□□□□ 0.78
RTL4Q6ZR62 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL4Q6ZR62 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 BX005040.4-201ENST00000637145 1518 ntBASIC19.92■□□□□ 0.78
RTL4Q6ZR62 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 CCDC92B-201ENST00000575506 885 ntBASIC19.92■□□□□ 0.78
RTL4Q6ZR62 AC104564.3-201ENST00000582367 638 ntBASIC19.92■□□□□ 0.78
RTL4Q6ZR62 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL4Q6ZR62 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 AC080038.3-201ENST00000623346 1952 ntBASIC19.91■□□□□ 0.78
RTL4Q6ZR62 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL4Q6ZR62 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 AC079089.2-201ENST00000531211 1277 ntBASIC19.9■□□□□ 0.78
RTL4Q6ZR62 DUX4L2-201ENST00000561772 1275 ntBASIC19.9■□□□□ 0.78
RTL4Q6ZR62 TERF1P2-201ENST00000583350 1212 ntBASIC19.9■□□□□ 0.78
RTL4Q6ZR62 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 DUX4L6-201ENST00000626483 1275 ntBASIC19.9■□□□□ 0.78
RTL4Q6ZR62 DUX4L1-201ENST00000627662 1275 ntBASIC19.9■□□□□ 0.78
RTL4Q6ZR62 DUX4L8-201ENST00000629013 1275 ntBASIC19.9■□□□□ 0.78
RTL4Q6ZR62 DUX4L3-201ENST00000630187 1275 ntBASIC19.9■□□□□ 0.78
RTL4Q6ZR62 DUX4L7-201ENST00000630678 1275 ntBASIC19.9■□□□□ 0.78
RTL4Q6ZR62 DUX4L5-201ENST00000630834 1275 ntBASIC19.9■□□□□ 0.78
RTL4Q6ZR62 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.9■□□□□ 0.78
RTL4Q6ZR62 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.89■□□□□ 0.78
RTL4Q6ZR62 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTL4Q6ZR62 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTL4Q6ZR62 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 C11orf96-202ENST00000528572 1834 ntBASIC19.89■□□□□ 0.77
RTL4Q6ZR62 KRT18P14-201ENST00000534205 1250 ntBASIC19.89■□□□□ 0.77
RTL4Q6ZR62 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 TPRG1LP1-201ENST00000598702 760 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms