Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 MIR5787-201ENST00000611784 55 ntBASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 AC005703.6-201ENST00000623265 1329 ntBASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.09■■□□□ 1.13
FOXR1Q6PIV2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 AC004448.1-201ENST00000458332 883 ntBASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.08■■□□□ 1.13
FOXR1Q6PIV2 AC087289.5-201ENST00000586076 3175 ntBASIC22.08■■□□□ 1.12
FOXR1Q6PIV2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
FOXR1Q6PIV2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
FOXR1Q6PIV2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
FOXR1Q6PIV2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.08■■□□□ 1.12
FOXR1Q6PIV2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
FOXR1Q6PIV2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
FOXR1Q6PIV2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.08■■□□□ 1.12
FOXR1Q6PIV2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXR1Q6PIV2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 AC104564.3-201ENST00000582367 638 ntBASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 SYT6-210ENST00000641643 1587 ntBASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.06■■□□□ 1.12
FOXR1Q6PIV2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 DUX4L19-201ENST00000557448 1267 ntBASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 AL136967.2-201ENST00000623968 743 ntBASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.05■■□□□ 1.12
FOXR1Q6PIV2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
FOXR1Q6PIV2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
FOXR1Q6PIV2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXR1Q6PIV2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
FOXR1Q6PIV2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms