Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPAL3Q6P499 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NIPAL3Q6P499 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NIPAL3Q6P499 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL3Q6P499 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.39■□□□□ 0.69
NIPAL3Q6P499 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 Z98882.1-201ENST00000622160 2253 ntBASIC19.38■□□□□ 0.69
NIPAL3Q6P499 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.38■□□□□ 0.69
NIPAL3Q6P499 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 AL031432.3-201ENST00000607698 485 ntBASIC19.37■□□□□ 0.69
NIPAL3Q6P499 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL3Q6P499 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 MIR638-201ENST00000385237 100 ntBASIC19.36■□□□□ 0.69
NIPAL3Q6P499 AP005435.1-201ENST00000529293 1178 ntBASIC19.36■□□□□ 0.69
NIPAL3Q6P499 AC142381.2-201ENST00000566120 298 ntBASIC19.36■□□□□ 0.69
NIPAL3Q6P499 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 AC005837.3-201ENST00000612163 286 ntBASIC19.36■□□□□ 0.69
NIPAL3Q6P499 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL3Q6P499 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 MIR939-201ENST00000401314 82 ntBASIC19.35■□□□□ 0.69
NIPAL3Q6P499 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.35■□□□□ 0.69
NIPAL3Q6P499 AC010141.3-201ENST00000456659 717 ntBASIC19.35■□□□□ 0.69
NIPAL3Q6P499 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NIPAL3Q6P499 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 AC091305.1-201ENST00000479476 895 ntBASIC19.34■□□□□ 0.69
NIPAL3Q6P499 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NIPAL3Q6P499 RASA4CP-201ENST00000424092 1398 ntBASIC19.33■□□□□ 0.69
NIPAL3Q6P499 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms