Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.17■□□□□ 0.18
CDPF1Q6NVV7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 AC244015.2-201ENST00000616358 1861 ntBASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 AC120498.9-201ENST00000339021 3867 ntBASIC16.16■□□□□ 0.18
CDPF1Q6NVV7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 TNXA-203ENST00000507684 2038 ntBASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 AC093536.1-201ENST00000569153 554 ntBASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 AP000974.1-201ENST00000623909 2387 ntBASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDPF1Q6NVV7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDPF1Q6NVV7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 DUX4L18-201ENST00000553347 1267 ntBASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDPF1Q6NVV7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 RAP2CP1-202ENST00000605179 643 ntBASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.13■□□□□ 0.17
CDPF1Q6NVV7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms