Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC144NLQ6NUI1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC144NLQ6NUI1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC144NLQ6NUI1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC144NLQ6NUI1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC144NLQ6NUI1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC144NLQ6NUI1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 AP006587.3-201ENST00000525742 1516 ntBASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC144NLQ6NUI1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC144NLQ6NUI1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC144NLQ6NUI1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 AC097381.1-201ENST00000429019 1296 ntBASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144NLQ6NUI1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 C11orf96-202ENST00000528572 1834 ntBASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 AC079140.4-201ENST00000507448 529 ntBASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 MIR6821-201ENST00000617625 74 ntBASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 FAM99A-202ENST00000538190 1989 ntBASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144NLQ6NUI1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144NLQ6NUI1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms