Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC27.22■■□□□ 1.95
RC3H1Q5TC82 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RC3H1Q5TC82 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RC3H1Q5TC82 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RC3H1Q5TC82 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC27.22■■□□□ 1.95
RC3H1Q5TC82 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.22■■□□□ 1.95
RC3H1Q5TC82 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.22■■□□□ 1.95
RC3H1Q5TC82 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.22■■□□□ 1.95
RC3H1Q5TC82 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RC3H1Q5TC82 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 AC091874.3-201ENST00000512672 1195 ntBASIC27.21■■□□□ 1.95
RC3H1Q5TC82 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 AC120498.10-201ENST00000621827 505 ntBASIC27.21■■□□□ 1.95
RC3H1Q5TC82 AP006294.2-201ENST00000641667 209 ntBASIC27.21■■□□□ 1.95
RC3H1Q5TC82 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H1Q5TC82 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
RC3H1Q5TC82 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC27.2■■□□□ 1.95
RC3H1Q5TC82 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
RC3H1Q5TC82 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
RC3H1Q5TC82 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RC3H1Q5TC82 IRX5-204ENST00000560154 879 ntTSL 5 BASIC27.2■■□□□ 1.94
RC3H1Q5TC82 AC008175.2-201ENST00000612840 297 ntBASIC27.2■■□□□ 1.94
RC3H1Q5TC82 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RC3H1Q5TC82 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC27.2■■□□□ 1.94
RC3H1Q5TC82 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H1Q5TC82 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
RC3H1Q5TC82 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H1Q5TC82 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H1Q5TC82 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H1Q5TC82 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H1Q5TC82 POU5F1P4-201ENST00000413175 1085 ntBASIC27.19■■□□□ 1.94
RC3H1Q5TC82 RNF146-206ENST00000480444 843 ntTSL 2 BASIC27.19■■□□□ 1.94
RC3H1Q5TC82 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H1Q5TC82 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H1Q5TC82 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 GAS7-202ENST00000396115 929 ntTSL 5 BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 BET1L-207ENST00000529614 560 ntTSL 5 BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RC3H1Q5TC82 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC27.17■■□□□ 1.94
RC3H1Q5TC82 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RC3H1Q5TC82 AC010980.2-201ENST00000587099 1412 ntBASIC27.17■■□□□ 1.94
RC3H1Q5TC82 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC27.17■■□□□ 1.94
RC3H1Q5TC82 MMAB-206ENST00000540016 945 ntTSL 3 BASIC27.17■■□□□ 1.94
RC3H1Q5TC82 AL591742.1-201ENST00000604433 565 ntBASIC27.17■■□□□ 1.94
RC3H1Q5TC82 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RC3H1Q5TC82 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RC3H1Q5TC82 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC27.16■■□□□ 1.94
RC3H1Q5TC82 RBM17P2-201ENST00000616397 1405 ntBASIC27.16■■□□□ 1.94
RC3H1Q5TC82 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 ISCU-212ENST00000547005 795 ntTSL 3 BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.15■■□□□ 1.94
RC3H1Q5TC82 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.14■■□□□ 1.94
RC3H1Q5TC82 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
RC3H1Q5TC82 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
RC3H1Q5TC82 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RC3H1Q5TC82 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.14■■□□□ 1.94
RC3H1Q5TC82 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.14■■□□□ 1.94
RC3H1Q5TC82 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
RC3H1Q5TC82 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC27.14■■□□□ 1.94
RC3H1Q5TC82 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC27.14■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms